A B C D E F G H I J K L M N O P R S T U V W X Y

A

a - Variable in class miralib.math.Geometry.IntersectPoint

add(Value1D) - Method in class miralib.data.DataSlice1D

add(double, double) - Method in class miralib.data.DataSlice1D

add(Value2D) - Method in class miralib.data.DataSlice2D

add(double, double, double) - Method in class miralib.data.DataSlice2D

addColumn(Variable) - Method in class miralib.data.DataSet

addColumns(ArrayList<Variable>) - Method in class miralib.data.DataSet

addCovariate(Variable) - Method in class miralib.data.DataSet

ADDED_RANGE - Static variable in class miralib.data.DataRanges

addGroup(String, int, int) - Method in class miralib.data.DataTree

addTable(String, int, int) - Method in class miralib.data.DataTree

addVariable(Variable) - Method in class miralib.data.DataTree

algorithmToString(int) - Static method in class miralib.shannon.Similarity

ALL - Static variable in class miralib.data.DataTree

B

b - Variable in class miralib.math.Geometry.IntersectPoint

binFile - Variable in class miralib.utils.Project

BinOptimizer - Class in miralib.shannon

Optimal Histogram bin size calculation from Shimazaki and Shinomoto: http://toyoizumilab.brain.riken.jp/hideaki/res/histogram.html

BinOptimizer() - Constructor for class miralib.shannon.BinOptimizer

C

calculate(DataSlice1D) - Static method in class miralib.shannon.BinOptimizer

calculate(DataSlice2D) - Static method in class miralib.shannon.BinOptimizer

calculate(DataSlice2D) - Static method in class miralib.shannon.JointEntropy

calculate(DataSlice2D, int, int) - Static method in class miralib.shannon.JointEntropy

calculate(DataSlice1D) - Static method in class miralib.shannon.MarginalEntropy

calculate(DataSlice1D, int) - Static method in class miralib.shannon.MarginalEntropy

calculate(DataSlice2D) - Static method in class miralib.shannon.MutualInformation

calculate(DataSlice2D, int, int) - Static method in class miralib.shannon.MutualInformation

calculate(DataSlice2D, float, Project) - Static method in class miralib.shannon.Similarity

canOpen() - Method in interface miralib.data.DataTree.Item

canOpen() - Method in class miralib.data.Variable

canOpen() - Method in class miralib.data.VariableContainer

categorical() - Method in class miralib.data.CategoricalVariable

categorical() - Method in class miralib.data.DateVariable

categorical() - Method in class miralib.data.NumericalVariable

categorical() - Method in class miralib.data.StringVariable

categorical() - Method in class miralib.data.Variable

CategoricalRange - Class in miralib.data

Range for a categorical variable (a set of categories).

CategoricalRange(Variable) - Constructor for class miralib.data.CategoricalRange

CategoricalRange(CategoricalRange) - Constructor for class miralib.data.CategoricalRange

CategoricalVariable - Class in miralib.data

Subclass of Variable to represent a categorical variable.

CategoricalVariable(String, int) - Constructor for class miralib.data.CategoricalVariable

cfgFile - Variable in class miralib.utils.Project

checkExtension(String) - Static method in class miralib.utils.Fileu

cleanup() - Method in class miralib.utils.Settings

cleanup(String) - Method in class miralib.utils.Settings

codeFile - Variable in class miralib.utils.Project

column() - Method in class miralib.data.Variable

computeDirection(float, float, float, float, float, float) - Static method in class miralib.math.Geometry

constrain(int) - Method in class miralib.data.CategoricalRange

constrain(long) - Method in class miralib.data.CategoricalRange

constrain(float) - Method in class miralib.data.CategoricalRange

constrain(double) - Method in class miralib.data.CategoricalRange

constrain(int) - Method in class miralib.data.DateRange

constrain(long) - Method in class miralib.data.DateRange

constrain(float) - Method in class miralib.data.DateRange

constrain(double) - Method in class miralib.data.DateRange

constrain(int) - Method in class miralib.data.DummyRange

constrain(long) - Method in class miralib.data.DummyRange

constrain(float) - Method in class miralib.data.DummyRange

constrain(double) - Method in class miralib.data.DummyRange

constrain(int) - Method in class miralib.data.NumericalRange

constrain(long) - Method in class miralib.data.NumericalRange

constrain(float) - Method in class miralib.data.NumericalRange

constrain(double) - Method in class miralib.data.NumericalRange

constrain(int) - Method in class miralib.data.Range

constrain(long) - Method in class miralib.data.Range

constrain(float) - Method in class miralib.data.Range

constrain(double) - Method in class miralib.data.Range

constrain(int, int, int) - Static method in class miralib.math.Numbers

constrain(float, float, float) - Static method in class miralib.math.Numbers

constrain(double, double, double) - Static method in class miralib.math.Numbers

countx - Variable in class miralib.data.DataSlice1D

countx - Variable in class miralib.data.DataSlice2D

county - Variable in class miralib.data.DataSlice2D

covariate() - Method in class miralib.data.Variable

create(Range) - Static method in class miralib.data.Range

create(int, String, int) - Static method in class miralib.data.Variable

createInput(File) - Static method in class miralib.utils.Fileu

createPath(File) - Static method in class miralib.utils.Fileu

createRange(double, double) - Method in class miralib.data.CategoricalVariable

createRange(double, double) - Method in class miralib.data.DateVariable

createRange(double, double) - Method in class miralib.data.NumericalVariable

createRange(double, double) - Method in class miralib.data.StringVariable

createRange(double, double) - Method in class miralib.data.Variable

createReader(String) - Method in class miralib.data.DataSet

createWriter(File) - Static method in class miralib.utils.Fileu

createWriter(OutputStream) - Static method in class miralib.utils.Fileu

D

dataFile - Variable in class miralib.utils.Project

dataFolder - Variable in class miralib.utils.Project

DataRanges - Class in miralib.data

Dictionary that links variables with their respective ranges.

DataRanges() - Constructor for class miralib.data.DataRanges

DataRanges(DataRanges) - Constructor for class miralib.data.DataRanges

DataSet - Class in miralib.data

Class holding all the information required to specify a dataset (tables, hierarchy tree, sort variable, etc.)

DataSet(Project) - Constructor for class miralib.data.DataSet

DataSlice1D - Class in miralib.data

1-dimensional data slice, i.e.: all the (normalized) data values for a single variable from the rows that satisfy the range conditions.

DataSlice1D(Variable, DataRanges) - Constructor for class miralib.data.DataSlice1D

DataSlice1D(Table, Variable, DataRanges) - Constructor for class miralib.data.DataSlice1D

DataSlice1D(Table, Variable, DataRanges, Variable) - Constructor for class miralib.data.DataSlice1D

DataSlice2D - Class in miralib.data

2-dimensional data slice, i.e.: all the (normalized) data value pairs for two variables from the rows that satisfy the range conditions.

DataSlice2D(Variable, Variable, DataRanges) - Constructor for class miralib.data.DataSlice2D

DataSlice2D(Table, Variable, Variable, DataRanges) - Constructor for class miralib.data.DataSlice2D

DataSlice2D(Table, Variable, Variable, DataRanges, Variable) - Constructor for class miralib.data.DataSlice2D

dataTitle - Variable in class miralib.utils.Project

DataTree - Class in miralib.data

A hierarchical data tree defined by groups, tables, and variables.

DataTree() - Constructor for class miralib.data.DataTree

DataTree(ArrayList<Variable>) - Constructor for class miralib.data.DataTree

DataTree.Item - Interface in miralib.data

dataURL - Variable in class miralib.utils.Project

DATE - Static variable in class miralib.data.MiraTable

dateParsePattern - Variable in class miralib.utils.Preferences

dateParsePattern - Variable in class miralib.utils.Project

datePrintPattern - Variable in class miralib.utils.Preferences

datePrintPattern - Variable in class miralib.utils.Project

DateRange - Class in miralib.data

DateRange(Variable) - Constructor for class miralib.data.DateRange

DateRange(DateRange) - Constructor for class miralib.data.DateRange

DateVariable - Class in miralib.data

DateVariable(String, int) - Constructor for class miralib.data.DateVariable

denormalize(double) - Method in class miralib.data.CategoricalRange

denormalize(double) - Method in class miralib.data.DateRange

denormalize(double) - Method in class miralib.data.NumericalRange

depTest - Variable in class miralib.utils.Preferences

depTest - Variable in class miralib.utils.Project

dictFile - Variable in class miralib.utils.Project

different(int, int) - Static method in class miralib.math.Numbers

different(long, long) - Static method in class miralib.math.Numbers

different(float, float) - Static method in class miralib.math.Numbers

different(double, double) - Static method in class miralib.math.Numbers

discrete() - Method in class miralib.data.CategoricalVariable

discrete() - Method in class miralib.data.DateVariable

discrete() - Method in class miralib.data.NumericalVariable

discrete() - Method in class miralib.data.StringVariable

discrete() - Method in class miralib.data.Variable

dispose() - Method in class miralib.data.DataSlice1D

dispose() - Method in class miralib.data.DataSlice2D

doLineSegmentsIntersect(float, float, float, float, float, float, float, float) - Static method in class miralib.math.Geometry

DOUBLE_EPS - Static variable in class miralib.math.Numbers

DummyRange - Class in miralib.data

Dummy ranger for variables not included in display/calculations (for example string variables).

DummyRange(Variable) - Constructor for class miralib.data.DummyRange

DummyRange(Range) - Constructor for class miralib.data.DummyRange

E

equal(int, int) - Static method in class miralib.math.Numbers

equal(long, long) - Static method in class miralib.math.Numbers

equal(float, float) - Static method in class miralib.math.Numbers

equal(double, double) - Static method in class miralib.math.Numbers

equals(Object) - Method in class miralib.data.CategoricalRange

equals(Object) - Method in class miralib.data.DateRange

equals(Object) - Method in class miralib.data.NumericalRange

equals(Value1D) - Method in class miralib.data.Value1D

equals(Value2D) - Method in class miralib.data.Value2D

error(String, Throwable) - Static method in class miralib.utils.Log

EXPONENTIAL - Static variable in class miralib.data.Variable

F

Fileu - Class in miralib.utils

Fileu() - Constructor for class miralib.utils.Fileu

FLOAT_EPS - Static variable in class miralib.math.Numbers

formatRange(Range, boolean) - Method in class miralib.data.CategoricalVariable

formatRange(Range, boolean) - Method in class miralib.data.DateVariable

formatRange(Range, boolean) - Method in class miralib.data.NumericalVariable

formatRange(Range, boolean) - Method in class miralib.data.StringVariable

formatRange() - Method in class miralib.data.Variable

formatRange(boolean) - Method in class miralib.data.Variable

formatRange(Range) - Method in class miralib.data.Variable

formatRange(Range, boolean) - Method in class miralib.data.Variable

formatType(int) - Static method in class miralib.data.Variable

formatValue(TableRow) - Method in class miralib.data.CategoricalVariable

formatValue(double, boolean) - Method in class miralib.data.CategoricalVariable

formatValue(double, Range) - Method in class miralib.data.CategoricalVariable

formatValue(TableRow) - Method in class miralib.data.DateVariable

formatValue(double, boolean) - Method in class miralib.data.DateVariable

formatValue(double, Range) - Method in class miralib.data.DateVariable

formatValue(TableRow) - Method in class miralib.data.NumericalVariable

formatValue(double, boolean) - Method in class miralib.data.NumericalVariable

formatValue(double, Range) - Method in class miralib.data.NumericalVariable

formatValue(TableRow) - Method in class miralib.data.StringVariable

formatValue(double, boolean) - Method in class miralib.data.StringVariable

formatValue(double, Range) - Method in class miralib.data.StringVariable

formatValue(TableRow) - Method in class miralib.data.Variable

formatValue(double, boolean) - Method in class miralib.data.Variable

formatValue(double, DataRanges) - Method in class miralib.data.Variable

formatValue(double, Range) - Method in class miralib.data.Variable

G

GAMMA_TEST - Static variable in class miralib.shannon.Similarity

Geometry - Class in miralib.math

Some handy geometry calculations (e.g.: line segment intersection, point-inside- polygon, etc.)

Geometry() - Constructor for class miralib.math.Geometry

Geometry.ClippedSegment - Class in miralib.math

Geometry.ClippedSegment() - Constructor for class miralib.math.Geometry.ClippedSegment

Geometry.ClippedSegment(float, float, float, float, boolean) - Constructor for class miralib.math.Geometry.ClippedSegment

Geometry.IntersectPoint - Class in miralib.math

Geometry.IntersectPoint() - Constructor for class miralib.math.Geometry.IntersectPoint

Geometry.IntersectPoint(float, float, boolean) - Constructor for class miralib.math.Geometry.IntersectPoint

get(Object) - Method in class miralib.data.DataRanges

get(String, String) - Method in class miralib.utils.Settings

getAlias() - Method in class miralib.data.Variable

getBinaryPath() - Method in class miralib.utils.Project

getBoolean(String, boolean) - Method in class miralib.utils.Settings

getCodebookPath() - Method in class miralib.utils.Project

getColor(String, Color) - Method in class miralib.utils.Settings

getColumn(Variable) - Method in class miralib.data.DataSet

getColumn(int) - Method in class miralib.data.DataSet

getColumnCount() - Method in class miralib.data.DataSet

getColumns() - Method in class miralib.data.DataSet

getColumnSelection() - Method in interface miralib.data.DataTree.Item

getColumnSelection() - Method in class miralib.data.Variable

getColumnSelection() - Method in class miralib.data.VariableContainer

getColumnType(int) - Method in class miralib.data.MiraTable

getCount() - Method in class miralib.data.CategoricalRange

getCount() - Method in class miralib.data.DateRange

getCount() - Method in class miralib.data.DummyRange

getCount() - Method in class miralib.data.NumericalRange

getCount() - Method in class miralib.data.Range

getCount() - Method in class miralib.data.Variable

getCount(DataRanges) - Method in class miralib.data.Variable

getCount(Range) - Method in class miralib.data.Variable

getCovariate(Variable) - Method in class miralib.data.DataSet

getCovariate(int) - Method in class miralib.data.DataSet

getCovariateCount() - Method in class miralib.data.DataSet

getDictionaryPath() - Method in class miralib.utils.Project

getFirstChild() - Method in interface miralib.data.DataTree.Item

getFirstChild() - Method in class miralib.data.Variable

getFirstChild() - Method in class miralib.data.VariableContainer

getFloat(String, float) - Method in class miralib.utils.Settings

getFont(String, String) - Method in class miralib.utils.Settings

getGroup(int) - Method in class miralib.data.DataTree

getGroupCount() - Method in class miralib.data.DataSet

getGroupsPath() - Method in class miralib.utils.Project

getGroupVariables(VariableContainer) - Method in class miralib.data.DataTree

getIndex() - Method in class miralib.data.Variable

getInteger(String, int) - Method in class miralib.utils.Settings

getItemType() - Method in interface miralib.data.DataTree.Item

getItemType() - Method in class miralib.data.Variable

getItemType() - Method in class miralib.data.VariableContainer

getLastChild() - Method in interface miralib.data.DataTree.Item

getLastChild() - Method in class miralib.data.Variable

getLastChild() - Method in class miralib.data.VariableContainer

getMax() - Method in class miralib.data.CategoricalRange

getMax() - Method in class miralib.data.DateRange

getMax() - Method in class miralib.data.DummyRange

getMax() - Method in class miralib.data.NumericalRange

getMax() - Method in class miralib.data.Range

getMin() - Method in class miralib.data.CategoricalRange

getMin() - Method in class miralib.data.DateRange

getMin() - Method in class miralib.data.DummyRange

getMin() - Method in class miralib.data.NumericalRange

getMin() - Method in class miralib.data.Range

getMissing(Variable, DataRanges) - Method in class miralib.data.DataSet

getMissingCategory() - Method in class miralib.data.MiraTable

getMissingDouble() - Method in class miralib.data.MiraTable

getMissingFloat() - Method in class miralib.data.MiraTable

getMissingInt() - Method in class miralib.data.MiraTable

getMissingLong() - Method in class miralib.data.MiraTable

getMissingString() - Method in class miralib.data.MiraTable

getName() - Method in interface miralib.data.DataTree.Item

getName() - Method in class miralib.data.Variable

getName() - Method in class miralib.data.VariableContainer

getProfile(ArrayList<Variable>) - Method in class miralib.data.DataSet

getRank(String) - Method in class miralib.data.CategoricalRange

getRank(String, Range) - Method in class miralib.data.CategoricalRange

getRank(String) - Method in class miralib.data.DateRange

getRank(String, Range) - Method in class miralib.data.DateRange

getRank(String) - Method in class miralib.data.DummyRange

getRank(String, Range) - Method in class miralib.data.DummyRange

getRank(String) - Method in class miralib.data.NumericalRange

getRank(String, Range) - Method in class miralib.data.NumericalRange

getRank(String) - Method in class miralib.data.Range

getRank(String, Range) - Method in class miralib.data.Range

getRecordCount() - Method in class miralib.data.DataSet

getRecordCount(DataRanges) - Method in class miralib.data.DataSet

getRowCount() - Method in class miralib.data.DataSet

getRowCount(DataRanges) - Method in class miralib.data.DataSet

getScaling(DataSlice1D) - Method in class miralib.data.Variable

getScore(Variable) - Method in class miralib.data.DataSet

getScore(int) - Method in class miralib.data.DataSet

getSlice(Variable, DataRanges) - Method in class miralib.data.DataSet

getSlice(Variable, Variable, DataRanges) - Method in class miralib.data.DataSet

getSliceX() - Method in class miralib.data.DataSlice2D

getSliceY() - Method in class miralib.data.DataSlice2D

getSourcePath() - Method in class miralib.utils.Project

getTable(ArrayList<Variable>, DataRanges) - Method in class miralib.data.DataSet

getTable(int) - Method in class miralib.data.DataTree

getTableCount() - Method in class miralib.data.DataSet

getTableVariables(VariableContainer) - Method in class miralib.data.DataTree

getTree() - Method in class miralib.data.DataSet

getType(String) - Static method in class miralib.data.Variable

getValue(String, boolean) - Method in class miralib.data.CategoricalVariable

getValue(TableRow, Range, boolean) - Method in class miralib.data.CategoricalVariable

getValue(String, boolean) - Method in class miralib.data.DateVariable

getValue(TableRow, Range, boolean) - Method in class miralib.data.DateVariable

getValue(String, boolean) - Method in class miralib.data.NumericalVariable

getValue(TableRow, Range, boolean) - Method in class miralib.data.NumericalVariable

getValue(String, boolean) - Method in class miralib.data.StringVariable

getValue(TableRow, Range, boolean) - Method in class miralib.data.StringVariable

getValue(String) - Method in class miralib.data.Variable

getValue(String, boolean) - Method in class miralib.data.Variable

getValue(TableRow, DataRanges) - Method in class miralib.data.Variable

getValue(TableRow, Range) - Method in class miralib.data.Variable

getValue(TableRow, Range, boolean) - Method in class miralib.data.Variable

getValues() - Method in class miralib.data.CategoricalRange

getValues() - Method in class miralib.data.DateRange

getValues() - Method in class miralib.data.DummyRange

getValues() - Method in class miralib.data.NumericalRange

getValues() - Method in class miralib.data.Range

getValues() - Method in class miralib.data.Variable

getVariable(int) - Method in class miralib.data.DataSet

getVariable(String) - Method in class miralib.data.DataSet

getVariable(int) - Method in class miralib.data.DataTree

getVariableCount() - Method in class miralib.data.DataSet

getVariableIndex(Variable) - Method in class miralib.data.DataSet

getVariables(VariableContainer) - Method in class miralib.data.DataSet

getVariables() - Method in class miralib.data.DataSet

getVariables(String) - Method in class miralib.data.DataSet

getWeight(TableRow) - Method in class miralib.data.Variable

getWeight(TableRow, Variable, Variable) - Static method in class miralib.data.Variable

GROUP_ITEM - Static variable in class miralib.data.DataTree

groups - Variable in class miralib.data.DataTree

grpmap - Variable in class miralib.data.DataTree

grpsFile - Variable in class miralib.utils.Project

guessedParse(InputStream, HashMap<String, DataSet.CodebookPage>, String, String) - Static method in class miralib.data.MiraTable

H

hasBinary() - Method in class miralib.utils.Project

hasCodebook() - Method in class miralib.utils.Project

hasDictionary() - Method in class miralib.utils.Project

hasGroups() - Method in class miralib.utils.Project

hasSource() - Method in class miralib.utils.Project

hex(int, int) - Static method in class miralib.utils.Settings

hist1D(ArrayList<Value1D>, int) - Static method in class miralib.shannon.BinOptimizer

hist2D(ArrayList<Value2D>, int, int) - Static method in class miralib.shannon.BinOptimizer

I

include() - Method in class miralib.data.Variable

init() - Static method in class miralib.utils.Log

initRange(Table) - Method in class miralib.data.CategoricalVariable

initRange(Table) - Method in class miralib.data.Variable

initValues(String) - Method in class miralib.data.CategoricalVariable

initValues(String) - Method in class miralib.data.DateVariable

initValues(String) - Method in class miralib.data.NumericalVariable

initValues(String) - Method in class miralib.data.StringVariable

initValues(String) - Method in class miralib.data.Variable

insertColumn(int, String, int) - Method in class miralib.data.MiraTable

inside(TableRow) - Method in class miralib.data.CategoricalRange

inside(TableRow) - Method in class miralib.data.DateRange

inside(TableRow) - Method in class miralib.data.DummyRange

inside(TableRow) - Method in class miralib.data.NumericalRange

inside(TableRow) - Method in class miralib.data.Range

inside - Variable in class miralib.math.Geometry.ClippedSegment

insideSample(TableRow) - Method in class miralib.data.Variable

intersect - Variable in class miralib.math.Geometry.IntersectPoint

intervalIntersection(float, float, float, float) - Static method in class miralib.math.Geometry

isOnSegment(float, float, float, float, float, float) - Static method in class miralib.math.Geometry

isPointInsideConvexPolygon(float...) - Static method in class miralib.math.Geometry

J

JointEntropy - Class in miralib.shannon

Calculation of the joint entropy of a 2D slice.

JointEntropy() - Constructor for class miralib.shannon.JointEntropy

K

keySet() - Method in class miralib.data.DataRanges

L

label - Variable in class miralib.data.Value1D

label - Variable in class miralib.data.Value2D

LINEAR - Static variable in class miralib.data.Variable

lineSegmentClipping(float, float, float, float, float, float, float, float) - Static method in class miralib.math.Geometry

lineSegmentIntersection(float, float, float, float, float, float, float, float) - Static method in class miralib.math.Geometry

load() - Method in class miralib.utils.Settings

loadStrings(File) - Static method in class miralib.utils.Fileu

loadStrings(InputStream) - Static method in class miralib.utils.Fileu

loadStrings(BufferedReader) - Static method in class miralib.utils.Fileu

Log - Class in miralib.utils

Message logging.

Log() - Constructor for class miralib.utils.Log

M

map(float, float, float, float, float) - Static method in class miralib.math.Numbers

map(double, double, float, double, float) - Static method in class miralib.math.Numbers

MarginalEntropy - Class in miralib.shannon

Calculation of the marginal entropy of a 1D slice.

MarginalEntropy() - Constructor for class miralib.shannon.MarginalEntropy

matchAlias(String) - Method in class miralib.data.Variable

matchName(String) - Method in class miralib.data.Variable

MAX_SLICE_SIZE - Static variable in class miralib.data.DataSlice1D

MAX_SLICE_SIZE - Static variable in class miralib.data.DataSlice2D

maxRange(Range) - Method in class miralib.data.Variable

message(String) - Static method in class miralib.utils.Log

min(int, int, int) - Static method in class miralib.math.Numbers

min(float, float, float) - Static method in class miralib.math.Numbers

min(double, double, double) - Static method in class miralib.math.Numbers

miralib.data - package miralib.data

miralib.math - package miralib.math

miralib.shannon - package miralib.shannon

miralib.utils - package miralib.utils

MiraTable - Class in miralib.data

Customized table class

MiraTable() - Constructor for class miralib.data.MiraTable

MiraTable(InputStream, String) - Constructor for class miralib.data.MiraTable

MISS_10 - Static variable in class miralib.utils.Project

MISS_20 - Static variable in class miralib.utils.Project

MISS_60 - Static variable in class miralib.utils.Project

MISS_80 - Static variable in class miralib.utils.Project

MISS_IGNORE - Static variable in class miralib.utils.Project

missing(TableRow) - Method in class miralib.data.CategoricalVariable

missing - Variable in class miralib.data.DataSlice1D

missing - Variable in class miralib.data.DataSlice2D

missing(TableRow) - Method in class miralib.data.DateVariable

missing(TableRow) - Method in class miralib.data.NumericalVariable

missing(TableRow) - Method in class miralib.data.StringVariable

missing(TableRow) - Method in class miralib.data.Variable

MISSING_DOUBLE - Static variable in class miralib.data.NumericalVariable

MISSING_FLOAT - Static variable in class miralib.data.NumericalVariable

MISSING_INT - Static variable in class miralib.data.NumericalVariable

MISSING_LONG - Static variable in class miralib.data.NumericalVariable

missingString - Variable in class miralib.utils.Preferences

missingString - Variable in class miralib.utils.Project

missingThreshold - Variable in class miralib.utils.Preferences

missingThreshold - Variable in class miralib.utils.Project

missingThreshold() - Method in class miralib.utils.Project

missingToString(int) - Static method in class miralib.utils.Project

MODIFIED_RANGE - Static variable in class miralib.data.DataRanges

MutualInformation - Class in miralib.shannon

Calculation of the mutual information of a 2D slice.

MutualInformation() - Constructor for class miralib.shannon.MutualInformation

N

NO_CHANGE - Static variable in class miralib.data.DataRanges

NO_TEST - Static variable in class miralib.shannon.Similarity

NONE - Static variable in class miralib.data.DataTree

NORMAL_TRANSFORM - Static variable in class miralib.shannon.Similarity

normalize(int) - Method in class miralib.data.CategoricalRange

normalize(long) - Method in class miralib.data.CategoricalRange

normalize(float) - Method in class miralib.data.CategoricalRange

normalize(double) - Method in class miralib.data.CategoricalRange

normalize(int) - Method in class miralib.data.DateRange

normalize(long) - Method in class miralib.data.DateRange

normalize(float) - Method in class miralib.data.DateRange

normalize(double) - Method in class miralib.data.DateRange

normalize(int) - Method in class miralib.data.DummyRange

normalize(long) - Method in class miralib.data.DummyRange

normalize(float) - Method in class miralib.data.DummyRange

normalize(double) - Method in class miralib.data.DummyRange

normalize(int) - Method in class miralib.data.NumericalRange

normalize(long) - Method in class miralib.data.NumericalRange

normalize(float) - Method in class miralib.data.NumericalRange

normalize(double) - Method in class miralib.data.NumericalRange

normalize(int) - Method in class miralib.data.Range

normalize(long) - Method in class miralib.data.Range

normalize(float) - Method in class miralib.data.Range

normalize(double) - Method in class miralib.data.Range

normalize(int) - Method in class miralib.data.Variable

normalize(long) - Method in class miralib.data.Variable

normalize(float) - Method in class miralib.data.Variable

normalize(double) - Method in class miralib.data.Variable

normalizeWeights(double) - Method in class miralib.data.DataSlice1D

normalizeWeights(double) - Method in class miralib.data.DataSlice2D

Numbers - Class in miralib.math

Basic utilities to deal with numeric values.

Numbers() - Constructor for class miralib.math.Numbers

numerical() - Method in class miralib.data.CategoricalVariable

numerical() - Method in class miralib.data.DateVariable

numerical() - Method in class miralib.data.NumericalVariable

numerical() - Method in class miralib.data.StringVariable

numerical() - Method in class miralib.data.Variable

NumericalRange - Class in miralib.data

Range for a numerical variable (a minimum and a maximum value).

NumericalRange(Variable) - Constructor for class miralib.data.NumericalRange

NumericalRange(NumericalRange) - Constructor for class miralib.data.NumericalRange

NumericalVariable - Class in miralib.data

Subclass of Variable to represent a numerical variable (integer, long, float or double).

NumericalVariable(String, int, int) - Constructor for class miralib.data.NumericalVariable

O

open() - Method in interface miralib.data.DataTree.Item

open() - Method in class miralib.data.Variable

open() - Method in class miralib.data.VariableContainer

P

P0_001 - Static variable in class miralib.utils.Project

P0_005 - Static variable in class miralib.utils.Project

P0_01 - Static variable in class miralib.utils.Project

P0_05 - Static variable in class miralib.utils.Project

P0_1 - Static variable in class miralib.utils.Project

P_IGNORE - Static variable in class miralib.utils.Project

parse(String) - Static method in class miralib.data.DateVariable

parseDouble(String) - Static method in class miralib.math.Numbers

parseDouble(String, double) - Static method in class miralib.math.Numbers

parseFloat(String) - Static method in class miralib.math.Numbers

parseFloat(String, float) - Static method in class miralib.math.Numbers

parseInt(String) - Static method in class miralib.math.Numbers

parseInt(String, int) - Static method in class miralib.math.Numbers

parseLong(String) - Static method in class miralib.math.Numbers

parseLong(String, int) - Static method in class miralib.math.Numbers

parsePrint(String) - Static method in class miralib.data.DateVariable

Preferences - Class in miralib.utils

Mirador preferences, that are used when no project file is provided.

Preferences() - Constructor for class miralib.utils.Preferences

Preferences(String) - Constructor for class miralib.utils.Preferences

print(DateTime) - Static method in class miralib.data.DateVariable

Project - Class in miralib.utils

Mirador project information.

Project(String, Preferences) - Constructor for class miralib.utils.Project

Project(Project) - Constructor for class miralib.utils.Project

projectFolder - Variable in class miralib.utils.Preferences

pValue - Variable in class miralib.utils.Preferences

pValue - Variable in class miralib.utils.Project

pvalue() - Method in class miralib.utils.Project

pvalueToString(int) - Static method in class miralib.utils.Project

R

Range - Class in miralib.data

Base abstract class to define variable ranges.

Range(Variable) - Constructor for class miralib.data.Range

Range(Range) - Constructor for class miralib.data.Range

ranges - Variable in class miralib.data.DataSlice1D

ranges - Variable in class miralib.data.DataSlice2D

removeColumn(Variable) - Method in class miralib.data.DataSet

removeColumns(ArrayList<Variable>) - Method in class miralib.data.DataSet

removeColumns(ArrayList<Variable>, Variable) - Method in class miralib.data.DataSet

removeCovariate(Variable) - Method in class miralib.data.DataSet

REMOVED_RANGE - Static variable in class miralib.data.DataRanges

reset() - Method in class miralib.data.CategoricalRange

reset() - Method in class miralib.data.DateRange

reset() - Method in class miralib.data.DummyRange

reset() - Method in class miralib.data.NumericalRange

reset() - Method in class miralib.data.Range

resort() - Method in class miralib.data.DataSet

resort(DataRanges) - Method in class miralib.data.DataSet

resort(float, float) - Method in class miralib.data.DataSet

S

save() - Method in class miralib.utils.Preferences

save(String) - Method in class miralib.utils.Project

save() - Method in class miralib.utils.Project

save() - Method in class miralib.utils.Settings

segmentCircleIntersection(float, float, float, float, float, float, float) - Static method in class miralib.math.Geometry

set(double, double, boolean) - Method in class miralib.data.CategoricalRange

set(ArrayList<String>) - Method in class miralib.data.CategoricalRange

set(String...) - Method in class miralib.data.CategoricalRange

set(double, double, boolean) - Method in class miralib.data.DateRange

set(ArrayList<String>) - Method in class miralib.data.DateRange

set(String...) - Method in class miralib.data.DateRange

set(double, double, boolean) - Method in class miralib.data.DummyRange

set(ArrayList<String>) - Method in class miralib.data.DummyRange

set(String...) - Method in class miralib.data.DummyRange

set(double, double, boolean) - Method in class miralib.data.NumericalRange

set(ArrayList<String>) - Method in class miralib.data.NumericalRange

set(String...) - Method in class miralib.data.NumericalRange

set(double, double) - Method in class miralib.data.Range

set(double, double, boolean) - Method in class miralib.data.Range

set(ArrayList<String>) - Method in class miralib.data.Range

set(String...) - Method in class miralib.data.Range

set(String, String) - Method in class miralib.utils.Settings

setAlias(String) - Method in class miralib.data.Variable

setBoolean(String, boolean) - Method in class miralib.utils.Settings

setClose() - Method in interface miralib.data.DataTree.Item

setClose() - Method in class miralib.data.Variable

setClose() - Method in class miralib.data.VariableContainer

setColor(String, Color) - Method in class miralib.utils.Settings

setColumnCount(int) - Method in class miralib.data.MiraTable

setColumnSelection(int) - Method in interface miralib.data.DataTree.Item

setColumnSelection(int) - Method in class miralib.data.Variable

setColumnSelection(int) - Method in class miralib.data.VariableContainer

setColumnType(int, String) - Method in class miralib.data.MiraTable

setColumnTypes(Table) - Method in class miralib.data.MiraTable

setCount(long) - Method in class miralib.data.DataSlice1D

setCount(long, long) - Method in class miralib.data.DataSlice2D

setFloat(String, float) - Method in class miralib.utils.Settings

setInteger(String, int) - Method in class miralib.utils.Settings

setMissing(float) - Method in class miralib.data.DataSlice1D

setMissing(float) - Method in class miralib.data.DataSlice2D

setMissingString(String) - Static method in class miralib.data.Variable

setOpen() - Method in interface miralib.data.DataTree.Item

setOpen() - Method in class miralib.data.Variable

setOpen() - Method in class miralib.data.VariableContainer

setParsePattern(String) - Static method in class miralib.data.DateVariable

setPrintPattern(String) - Static method in class miralib.data.DateVariable

setSubsample() - Method in class miralib.data.Variable

Settings - Class in miralib.utils

Generic class to store program preferences.

Settings(File) - Constructor for class miralib.utils.Settings

setWeight() - Method in class miralib.data.Variable

setWeightVariable(Variable) - Method in class miralib.data.Variable

shuffle() - Method in class miralib.data.DataSlice2D

Similarity - Class in miralib.shannon

Similarity score between two variables.

Similarity() - Constructor for class miralib.shannon.Similarity

snap(double) - Method in class miralib.data.CategoricalRange

snap(double) - Method in class miralib.data.DateRange

snap(double) - Method in class miralib.data.DummyRange

snap(double) - Method in class miralib.data.NumericalRange

snap(double) - Method in class miralib.data.Range

snapValue(double, Range, boolean) - Method in class miralib.data.CategoricalVariable

snapValue(double, Range, boolean) - Method in class miralib.data.DateVariable

snapValue(double, Range, boolean) - Method in class miralib.data.NumericalVariable

snapValue(double, Range, boolean) - Method in class miralib.data.StringVariable

snapValue(double, Range) - Method in class miralib.data.Variable

snapValue(double, Range, boolean) - Method in class miralib.data.Variable

SOME - Static variable in class miralib.data.DataTree

sort(Variable, DataRanges, float, float) - Method in class miralib.data.DataSet

sortColumn(Variable) - Method in class miralib.data.DataSet

sorted() - Method in class miralib.data.DataSet

sorting() - Method in class miralib.data.DataSet

sortKey() - Method in class miralib.data.DataSet

sortKey() - Method in class miralib.data.Variable

sortProgress() - Method in class miralib.data.DataSet

stopSorting() - Method in class miralib.data.DataSet

string() - Method in class miralib.data.CategoricalVariable

string() - Method in class miralib.data.DateVariable

string() - Method in class miralib.data.NumericalVariable

string() - Method in class miralib.data.StringVariable

string() - Method in class miralib.data.Variable

stringToAlgorithm(String) - Static method in class miralib.shannon.Similarity

stringToMissing(String) - Static method in class miralib.utils.Project

stringToPValue(String) - Static method in class miralib.utils.Project

StringVariable - Class in miralib.data

String variable, not used in calculations but can be used to generate labels.

StringVariable(String, int) - Constructor for class miralib.data.StringVariable

subsample() - Method in class miralib.data.Variable

supportedDateString(String) - Static method in class miralib.data.MiraTable

surrCount - Variable in class miralib.utils.Preferences

surrCount - Variable in class miralib.utils.Project

SURROGATE_GAUSS - Static variable in class miralib.shannon.Similarity

SURROGATE_GENERAL - Static variable in class miralib.shannon.Similarity

T

TABLE_ITEM - Static variable in class miralib.data.DataTree

tables - Variable in class miralib.data.DataTree

tabmap - Variable in class miralib.data.DataTree

threshold - Variable in class miralib.utils.Preferences

threshold - Variable in class miralib.utils.Project

toString() - Method in class miralib.data.CategoricalRange

toString() - Method in class miralib.data.DataRanges

toString() - Method in class miralib.data.DateRange

toString() - Method in class miralib.data.NumericalRange

type() - Method in class miralib.data.CategoricalVariable

type() - Method in class miralib.data.DateVariable

type() - Method in class miralib.data.NumericalVariable

type() - Method in class miralib.data.StringVariable

type() - Method in class miralib.data.Variable

typedParse(InputStream, String) - Method in class miralib.data.MiraTable

typedParse(InputStream, Table, String, String) - Static method in class miralib.data.MiraTable

U

UNDEFINED - Static variable in class miralib.data.Variable

uniformBins1D(ArrayList<Value1D>, int) - Static method in class miralib.shannon.BinOptimizer

uniformize(int, int) - Method in class miralib.data.DataSlice2D

uniformTransform1D(double, float[]) - Static method in class miralib.shannon.BinOptimizer

unsort() - Method in class miralib.data.DataSet

unsorted() - Method in class miralib.data.DataSet

update(TableRow) - Method in class miralib.data.CategoricalRange

update(Variable, Range) - Method in class miralib.data.DataRanges

update(TableRow) - Method in class miralib.data.DateRange

update(TableRow) - Method in class miralib.data.DummyRange

update(TableRow) - Method in class miralib.data.NumericalRange

update(TableRow) - Method in class miralib.data.Range

updateColumns() - Method in class miralib.data.DataTree

V

Value1D - Class in miralib.data

A 1-dimensional weighted value.

Value1D(double) - Constructor for class miralib.data.Value1D

Value1D(double, double) - Constructor for class miralib.data.Value1D

Value1D(Value1D) - Constructor for class miralib.data.Value1D

Value2D - Class in miralib.data

A 2-dimensional weighted value.

Value2D(double, double) - Constructor for class miralib.data.Value2D

Value2D(double, double, double) - Constructor for class miralib.data.Value2D

Value2D(Value1D, Value1D) - Constructor for class miralib.data.Value2D

Value2D(Value2D) - Constructor for class miralib.data.Value2D

valueAlias(String) - Method in class miralib.data.CategoricalVariable

valueAlias(String) - Method in class miralib.data.DateVariable

valueAlias(String) - Method in class miralib.data.NumericalVariable

valueAlias(String) - Method in class miralib.data.StringVariable

valueAlias(String) - Method in class miralib.data.Variable

values - Variable in class miralib.data.DataSlice1D

values - Variable in class miralib.data.DataSlice2D

var - Variable in class miralib.data.Range

Variable - Class in miralib.data

Class holding all the meta-information needed to define a variable in the dataset (name, alias, min/max range, etc.)

Variable(String, int) - Constructor for class miralib.data.Variable

VARIABLE_ITEM - Static variable in class miralib.data.DataTree

VariableContainer - Class in miralib.data

Element to store an item in the data tree (either group, table or variable).

VariableContainer(String, int, int, int) - Constructor for class miralib.data.VariableContainer

variables - Variable in class miralib.data.DataTree

varmap - Variable in class miralib.data.DataTree

varx - Variable in class miralib.data.DataSlice1D

varx - Variable in class miralib.data.DataSlice2D

vary - Variable in class miralib.data.DataSlice2D

W

w - Variable in class miralib.data.Value1D

w - Variable in class miralib.data.Value2D

warning(String) - Static method in class miralib.utils.Log

weight() - Method in class miralib.data.Variable

weighted() - Method in class miralib.data.Variable

whole(float) - Static method in class miralib.math.Numbers

whole(double) - Static method in class miralib.math.Numbers

X

x - Variable in class miralib.data.Value1D

x - Variable in class miralib.data.Value2D

x0 - Variable in class miralib.math.Geometry.ClippedSegment

x1 - Variable in class miralib.math.Geometry.ClippedSegment

Y

y - Variable in class miralib.data.Value2D

y0 - Variable in class miralib.math.Geometry.ClippedSegment

y1 - Variable in class miralib.math.Geometry.ClippedSegment

A B C D E F G H I J K L M N O P R S T U V W X Y